HL_3QSY_005
3D structure
- PDB id
- 3QSY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in Archaea
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUUCAAAUCC
- Length
- 11 nucleotides
- Bulged bases
- 3QSY|1|D|C|56, 3QSY|1|D|A|57, 3QSY|1|D|A|59
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3QSY_005 not in the Motif Atlas
- Homologous match to HL_4WT8_137
- Geometric discrepancy: 0.5825
- The information below is about HL_4WT8_137
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23827.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3QSY|1|D|G|52
3QSY|1|D|G|53
3QSY|1|D|U|54
3QSY|1|D|U|55
3QSY|1|D|C|56
3QSY|1|D|A|57
3QSY|1|D|A|58
3QSY|1|D|A|59
3QSY|1|D|U|60
3QSY|1|D|C|61
3QSY|1|D|C|62
Current chains
- Chain D
- tRNA
Nearby chains
- Chain A
- Translation initiation factor 2 subunit gamma
- Chain B
- Translation initiation factor 2 subunit alpha
Coloring options: