HL_3R8N_041

3D structure

PDB id

3R8N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

3R8N|1|A|C|188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3R8N_041 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.2396

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

3R8N|1|A|C|186
3R8N|1|A|G|187
3R8N|1|A|C|188
3R8N|1|A|A|189
3R8N|1|A|A|190
3R8N|1|A|G|191

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20