HL_3R8O_057

3D structure

PDB id

3R8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3R8O_057 not in the Motif Atlas

Geometric match to HL_4V88_210

Geometric discrepancy: 0.2407

The information below is about HL_4V88_210

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

3R8O|1|A|A|1012
3R8O|1|A|G|1013
3R8O|1|A|A|1014
3R8O|1|A|G|1015
3R8O|1|A|A|1016
3R8O|1|A|U|1017

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14

Chain S

30S ribosomal protein S19