HL_3SKL_005
3D structure
- PDB id
- 3SKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 2'- deoxyguanosine riboswitch bound to 2'-deoxyguanosine, iridium hexammine soak
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GACCCCGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 26
Unit IDs
3SKL|1|B|G|52
3SKL|1|B|A|53
3SKL|1|B|C|54
3SKL|1|B|C|55
3SKL|1|B|C|56
3SKL|1|B|C|57
3SKL|1|B|G|58
3SKL|1|B|C|59
Current chains
- Chain B
- RNA (66-MER)
Nearby chains
- Chain A
- RNA (66-MER)
Coloring options: