3SKL Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3SKL_001 | 1/A/38:46 | No text annotation | geometric HL_3SKI_001 HL_20743.5 | |
| HL_3SKL_002 | 1/A/52:59 | Pseudoknot geometry | geometric HL_3SKL_005 HL_93324.4 | |
| HL_3SKL_003 | 1/A/66:71 | No text annotation | geometric HL_3SKI_003 HL_14333.1 | |
| HL_3SKL_004 | 1/B/38:46 | No text annotation HL_20743.5 | ||
| HL_3SKL_005 | 1/B/52:59 | Pseudoknot geometry HL_93324.4 | ||
| HL_3SKL_007 | 1/B/66:71 | No text annotation HL_14333.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_3SKL_006 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3SKL_001 | 1/A/29:33, 1/A/51:60, 1/A/77:80 | No text annotation | geometric J3_3SKL_002 J3_44163.2 | |
| J3_3SKL_002 | 1/B/29:33, 1/B/51:60, 1/B/77:80 | No text annotation J3_44163.2 | ||
| J4_3SKL_001 | 1/A/29:33, 1/A/51:52, 1/A/59:60, 1/A/77:80 | No text annotation | ||
| J4_3SKL_002 | 1/B/29:33, 1/B/51:52, 1/B/59:60, 1/B/77:80 | Purine riboswitch junction J4_07491.2 |
Problematic loops
No problematic loops
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