HL_3U56_001

3D structure

PDB id

3U56 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of mutant ribosomal protein T217V TthL1 in complex with 80nt 23S RNA from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

3U56|1|B|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3U56_001 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.0781

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

3U56|1|B|C|2143
3U56|1|B|U|2144
3U56|1|B|C|2145
3U56|1|B|C|2146
3U56|1|B|G|2147
3U56|1|B|G|2148

Current chains

Chain B

RNA (80-MER)

Nearby chains