HL_3U5H_056

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAAACGAUAACG

Length

13 nucleotides

Bulged bases (A, C, G, U)

2637A, 2644C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41833.7

Basepair signature

cWW-tSH-tHH-tWW-R-R-R

Number of instances in this motif group

10

Unit IDs

3U5H|1|5|U|2633
3U5H|1|5|U|2634
3U5H|1|5|A|2635
3U5H|1|5|A|2636
3U5H|1|5|A|2637
3U5H|1|5|C|2638
3U5H|1|5|G|2639
3U5H|1|5|A|2640
3U5H|1|5|U|2641
3U5H|1|5|A|2642
3U5H|1|5|A|2643
3U5H|1|5|C|2644
3U5H|1|5|G|2645

Current chains

Chain 5

25S rRNA

Nearby chains