Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_3U5H_0011/5/38:45No text annotation
geometric
HL_5TBW_001
NA
HL_3U5H_0021/5/69:74No text annotation
geometric
HL_5TBW_002
NA
HL_3U5H_0031/5/90:96No text annotation
geometric
HL_5TBW_003
NA
HL_3U5H_0041/5/132:136No text annotation
geometric
HL_5TBW_004
NA
HL_3U5H_0051/5/194:201T-loop with 2 stacked bulged bases
geometric
HL_5TBW_005
NA
HL_3U5H_0061/5/208:212No text annotation
geometric
HL_5TBW_006
NA
HL_3U5H_0071/5/216:224T-loop with unstacked turn
geometric
HL_5TBW_007
NA
HL_3U5H_0081/5/278:287No text annotation
geometric
HL_5TBW_008
NA
HL_3U5H_0091/5/303:312Pseudoknot geometry
geometric
HL_5TBW_009
NA
HL_3U5H_0101/5/357:362GNRA
geometric
HL_5TBW_010
NA
HL_3U5H_0111/5/382:387GNRA
geometric
HL_5TBW_011
NA
HL_3U5H_0121/5/543:548No text annotation
geometric
HL_2IZN_001
HL_48417.5
HL_3U5H_0131/5/599:604GNRA
geometric
HL_5TBW_013
NA
HL_3U5H_0141/5/640:649T-loop with 2 stacked bulged bases
geometric
HL_5TBW_014
NA
HL_3U5H_0151/5/686:694No text annotation
geometric
HL_5TBW_015
NA
HL_3U5H_0161/5/707:712GNRA
geometric
HL_5TBW_016
NA
HL_3U5H_0171/5/732:737GNRA
geometric
HL_5TBW_019
NA
HL_3U5H_0181/5/763:768No text annotation
geometric
HL_5TBW_018
NA
HL_3U5H_0191/5/844:849GNRA
geometric
HL_5B2P_001
HL_37824.7
HL_3U5H_0201/5/876:885No text annotation
geometric
HL_5TBW_020
NA
HL_3U5H_0211/5/910:918No text annotation
geometric
HL_5TBW_021
NA
HL_3U5H_0221/5/958:963No text annotation
geometric
HL_2Y8W_001
HL_81100.2
HL_3U5H_0241/5/1076:1083No text annotation
geometric
HL_5TBW_024
NA
HL_3U5H_0251/5/1126:1132GNRA
geometric
HL_5TBW_025
NA
HL_3U5H_0261/5/1148:1155No text annotation
geometric
HL_1WZ2_007
HL_75660.5
HL_3U5H_0301/5/1403:1408GNRA
geometric
HL_5TBW_030
NA
HL_3U5H_0311/5/1462:1470T-loop with 2 stacked bulged bases
geometric
HL_5TBW_031
NA
HL_3U5H_0321/5/1506:1512Pseudoknot geometry with 3' bulge
geometric
HL_5TBW_032
NA
HL_3U5H_0331/5/1544:1549GNRA variation
geometric
HL_5TBW_033
NA
HL_3U5H_0351/5/1599:1608No text annotation
geometric
HL_5TBW_035
NA
HL_3U5H_0361/5/1634:1639GNRA
geometric
HL_5TBW_036
NA
HL_3U5H_0371/5/1680:1688No text annotation
geometric
HL_5TBW_037
NA
HL_3U5H_0381/5/1719:1725No text annotation
geometric
HL_5TBW_038
NA
HL_3U5H_0401/5/1792:1796Mini UNCG
geometric
HL_5TBW_040
NA
HL_3U5H_0411/5/1844:1851No text annotation
geometric
HL_5TBW_041
NA
HL_3U5H_0421/5/1862:1868GNRA
geometric
HL_5TBW_042
NA
HL_3U5H_0431/5/1923:1928UNCG
geometric
HL_5TBW_043
NA
HL_3U5H_0451/5/2110:2114No text annotation
geometric
HL_5TBW_045
NA
HL_3U5H_0461/5/2135:2145No text annotation
geometric
HL_5TBW_046
NA
HL_3U5H_0471/5/2164:2170GNRA
geometric
HL_5TBW_047
NA
HL_3U5H_0481/5/2220:2225GNRA
geometric
HL_5TBW_048
NA
HL_3U5H_0491/5/2253:2263No text annotation
geometric
HL_5TBW_049
NA
HL_3U5H_0501/5/2292:2300No text annotation
geometric
HL_5TBW_050
NA
HL_3U5H_0511/5/2369:2378No text annotation
geometric
HL_5TBW_051
NA
HL_3U5H_0541/5/2568:2573No text annotation
geometric
HL_2Y8W_001
HL_81100.2
HL_3U5H_0551/5/2616:2624No text annotation
geometric
HL_5TBW_054
NA
HL_3U5H_0561/5/2633:2645No text annotation
geometric
HL_5TBW_055
NA
HL_3U5H_0571/5/2673:2681No text annotation
geometric
HL_5TBW_056
NA
HL_3U5H_0581/5/2693:2700Pseudoknot geometry
geometric
HL_5TBW_057
NA
HL_3U5H_0591/5/2724:2732No text annotation
geometric
HL_5TBW_058
NA
HL_3U5H_0601/5/2744:2749GNRA
geometric
HL_5TBW_059
NA
HL_3U5H_0611/5/2776:2784Pseudoknot geometry
geometric
HL_5TBW_060
NA
HL_3U5H_0621/5/2840:2848No text annotation
geometric
HL_5TBW_061
NA
HL_3U5H_0631/5/2897:2904No text annotation
geometric
HL_5TBW_062
NA
HL_3U5H_0641/5/2920:2926No text annotation
geometric
HL_5TBW_063
NA
HL_3U5H_0651/5/2963:2968GNRA
geometric
HL_4V9F_065
HL_37824.7
HL_3U5H_0661/5/3025:3030GNRA
geometric
HL_5TBW_065
NA
HL_3U5H_0671/5/3068:3073Ribsomal LSU H95
geometric
HL_5TBW_066
NA
HL_3U5H_0681/5/3110:3124No text annotation
geometric
HL_5TBW_067
NA
HL_3U5H_0691/5/3194:3197Mini UNCG
geometric
HL_4L8H_001
HL_48778.2
HL_3U5H_0701/5/3240:3247No text annotation
geometric
HL_2Y9H_003
HL_75660.5
HL_3U5H_0711/5/3303:3311No text annotation
geometric
HL_5TBW_070
NA
HL_3U5H_0721/5/3350:3353Mini UNCG
geometric
HL_4L8H_001
HL_48778.2
HL_3U5H_0731/7/36:41No text annotation
geometric
HL_5TBW_185
NA
HL_3U5H_0741/7/88:93GNRA
geometric
HL_5TBW_186
NA
HL_3U5H_0751/8/69:89No text annotation
HL_3U5H_0761/8/108:114No text annotation
geometric
HL_5TBW_075
NA
HL_3U5H_0771/8/124:129No text annotation
geometric
HL_5TBW_076
NA

Problematic loops

#loop idProblemSequence
HL_3U5H_023No text annotation
HL_3U5H_027No text annotation
HL_3U5H_028GNRA wlth tandem sheared
HL_3U5H_029No text annotation
HL_3U5H_034No text annotation
HL_3U5H_039GNRA
HL_3U5H_044No text annotation
HL_3U5H_052No text annotation
HL_3U5H_053No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_3U5H_0021/5/7:8,
1/8/150:152
Single bulged C
geometric
IL_5TBW_002
NA
IL_3U5H_0031/5/13:15,
1/8/144:145
Single bulged U
geometric
IL_5TBW_003
NA
IL_3U5H_0041/5/27:28,
1/5/56:58
Single stack bend
geometric
IL_5TBW_004
NA
IL_3U5H_0051/5/31:38,
1/5/45:53
tSH-tHW-tHH-tHS
geometric
IL_5TBW_005
NA
IL_3U5H_0061/5/82:89,
1/5/97:103
8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_006
NA
IL_3U5H_0071/5/123:124,
1/5/144:149
No text annotation
geometric
IL_5TBW_007
NA
IL_3U5H_0081/5/125:127,
1/5/141:143
Isolated non-canonical cWW pair
geometric
IL_5TBW_008
NA
IL_3U5H_0091/5/163:165,
1/5/257:258
Single stack bend
geometric
IL_5TBW_009
NA
IL_3U5H_0131/5/189:191,
1/5/204:205
Single bulged U
geometric
IL_5TBW_012
NA
IL_3U5H_0141/5/337:339,
1/8/25:26
Single bulged A
geometric
IL_5TBW_013
NA
IL_3U5H_0151/5/376:379,
1/5/390:403
No text annotation
geometric
IL_5TBW_014
NA
IL_3U5H_0161/5/404:410,
1/8/13:19
Triple sheared with non-canonical cWW
geometric
IL_5TBW_015
NA
IL_3U5H_0171/5/429:431,
1/5/628:630
Isolated non-canonical cWW pair
geometric
IL_5TBW_016
NA
IL_3U5H_0191/5/512:513,
1/5/577:579
Single bulged A
geometric
IL_5TBW_018
NA
IL_3U5H_0201/5/517:525,
1/5/567:573
No text annotation
geometric
IL_5TBW_019
NA
IL_3U5H_0211/5/531:538,
1/5/553:561
No text annotation
geometric
IL_5TBW_020
NA
IL_3U5H_0221/5/668:670,
1/5/792:794
Isolated non-canonical cWW pair
geometric
IL_5TBW_021
NA
IL_3U5H_0231/5/680:684,
1/5/696:700
No text annotation
geometric
IL_5TBW_022
NA
IL_3U5H_0241/5/725:728,
1/5/741:745
UAA/GAN
geometric
IL_5TBW_023
NA
IL_3U5H_0251/5/752:753,
1/5/779:781
Single bulged A
geometric
IL_5TBW_024
NA
IL_3U5H_0261/5/755:756,
1/5/775:777
Single bulged U
geometric
IL_5TBW_025
NA
IL_3U5H_0271/5/758:763,
1/5/768:773
No text annotation
geometric
IL_5TBW_026
NA
IL_3U5H_0281/5/803:805,
1/5/938:940
Isolated non-canonical cWW pair
geometric
IL_5TBW_027
NA
IL_3U5H_0291/5/805:809,
1/5/931:938
tHW-tHW cross-strand stack
geometric
IL_5TBW_028
NA
IL_3U5H_0301/5/828:829,
1/5/895:897
Single bulged A
geometric
IL_5J7L_261
IL_31462.6
IL_3U5H_0311/5/833:834,
1/5/859:861
Single bulged G
geometric
IL_5TBW_029
NA
IL_3U5H_0321/5/834:838,
1/5/855:859
Triple sheared
geometric
IL_5J7L_263
IL_50730.2
IL_3U5H_0331/5/869:872,
1/5/888:890
Major groove platform with extra cWW
geometric
IL_5TBW_031
NA
IL_3U5H_0341/5/873:875,
1/5/886:887
Single bulged U
geometric
IL_5TBW_032
NA
IL_3U5H_0351/5/907:909,
1/5/919:923
Multiple bulged bases
geometric
IL_5TBW_033
NA
IL_3U5H_0361/5/954:956,
1/5/965:967
Isolated non-canonical cWW pair
geometric
IL_5TBW_034
NA
IL_3U5H_0371/5/969:970,
1/5/1111:1113
Single stack bend
geometric
IL_5TBW_035
NA
IL_3U5H_0391/5/983:985,
1/5/1099:1100
Single bulged G
geometric
IL_5TBW_037
NA
IL_3U5H_0401/5/991:997,
1/5/1052:1058
7x7 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_5TBW_038
NA
IL_3U5H_0411/5/997:998,
1/5/1050:1052
Minor groove platform
geometric
IL_5TBW_039
NA
IL_3U5H_0421/5/999:1004,
1/5/1046:1049
C-loop with bulged stacked A's
geometric
IL_5TBW_040
NA
IL_3U5H_0431/5/1006:1009,
1/5/1041:1044
Tandem non-canonical cWW pairs
geometric
IL_5TBW_041
NA
IL_3U5H_0441/5/1009:1011,
1/5/1039:1041
Isolated non-canonical cWW pair
geometric
IL_5TBW_042
NA
IL_3U5H_0461/5/1015:1018,
1/5/1034:1035
Multiple bulged bases
geometric
IL_4LFB_005
IL_82107.4
IL_3U5H_0491/5/1069:1071,
1/5/1087:1089
Isolated non-canonical cWW pair
geometric
IL_5TBW_044
NA
IL_3U5H_0501/5/1074:1076,
1/5/1083:1084
Single bulged A
geometric
IL_5TBW_045
NA
IL_3U5H_0511/5/1120:1122,
1/5/1136:1138
Isolated non-canonical cWW pair
geometric
IL_5TBW_046
NA
IL_3U5H_0521/5/1123:1125,
1/5/1133:1135
Isolated cWS basepair
geometric
IL_5TBW_047
NA
IL_3U5H_0531/5/1167:1171,
1/5/1328:1332
UAA/GAN
geometric
IL_5TBW_048
NA
IL_3U5H_0541/5/1173:1180,
1/5/1325:1326
SSU/LSU pseudoknot
geometric
IL_5TBW_049
NA
IL_3U5H_0551/5/1180:1182,
1/5/1324:1325
Single bulged U
geometric
IL_5TBW_050
NA
IL_3U5H_0561/5/1187:1194,
1/5/1314:1319
No text annotation
geometric
IL_5TBW_051
NA
IL_3U5H_0571/5/1194:1205,
1/5/1299:1314
No text annotation
geometric
IL_5TBW_052
NA
IL_3U5H_0581/5/1207:1209,
1/5/1296:1297
Single bulged U
geometric
IL_5TBW_053
NA
IL_3U5H_0621/5/1376:1378,
1/5/1428:1431
Isolated cWS basepair
geometric
IL_5TBW_057
NA
IL_3U5H_0631/5/1385:1387,
1/5/1420:1421
Single bulged A
geometric
IL_5TBW_058
NA
IL_3U5H_0641/5/1388:1395,
1/5/1415:1419
Kink-turn
geometric
IL_5TBW_059
NA
IL_3U5H_0651/5/1398:1400,
1/5/1411:1412
Single bulged A
geometric
IL_5TBW_060
NA
IL_3U5H_0661/5/1444:1450,
1/5/2354:2359
7x6 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_061
NA
IL_3U5H_0671/5/1492:1495,
1/5/1835:1836
Major groove platform; stack outside cWW
geometric
IL_4V9F_050
IL_50694.7
IL_3U5H_0681/5/1500:1505,
1/5/1513:1516
No text annotation
geometric
IL_5TBW_062
NA
IL_3U5H_0691/5/1532:1536,
1/5/1585:1590
UAA/GAN
geometric
IL_5TBW_063
NA
IL_3U5H_0711/5/1618:1621,
1/5/1824:1826
Other IL
geometric
IL_5TBW_064
NA
IL_3U5H_0741/5/1627:1631,
1/5/1811:1816
No text annotation
geometric
IL_5TBW_066
NA
IL_3U5H_0751/5/1645:1649,
1/5/1806:1810
Triple sheared
geometric
IL_5TBW_067
NA
IL_3U5H_0761/5/1661:1663,
1/5/1786:1788
Isolated non-canonical cWW pair
geometric
IL_5TBW_068
NA
IL_3U5H_0771/5/1669:1670,
1/5/1778:1780
Single bulged C
geometric
IL_5TBW_069
NA
IL_3U5H_0781/5/1670:1671,
1/5/1776:1778
Single stack bend
geometric
IL_5TBW_070
NA
IL_3U5H_0791/5/1694:1698,
1/5/1747:1752
No text annotation
geometric
IL_5TBW_071
NA
IL_3U5H_0801/5/1702:1707,
1/5/1737:1743
No text annotation
geometric
IL_5TBW_072
NA
IL_3U5H_0811/5/1711:1717,
1/5/1727:1733
Kink-turn
geometric
IL_5TBW_073
NA
IL_3U5H_0821/5/1883:1889,
1/5/2346:2349
No text annotation
geometric
IL_5TBW_074
NA
IL_3U5H_0831/5/1895:1897,
1/5/2338:2340
Isolated tWW turn
geometric
IL_4V9F_060
IL_67095.2
IL_3U5H_0841/5/1898:1901,
1/5/2336:2337
Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA
IL_3U5H_0851/5/1901:1906,
1/5/2333:2336
Intercalated tWH
geometric
IL_5TBW_077
NA
IL_3U5H_0861/5/1918:1923,
1/5/1928:1934
tSH-tSH-tHH-tHS
geometric
IL_5TBW_078
NA
IL_3U5H_0871/5/1940:1942,
1/5/2106:2108
Isolated non-canonical cWW pair
geometric
IL_5TBW_079
NA
IL_3U5H_0881/5/1947:1948,
1/5/2098:2101
No text annotation
geometric
IL_5TBW_080
NA
IL_3U5H_0891/5/2128:2129,
1/5/2323:2325
Single bulged A
geometric
IL_5TBW_082
NA
IL_3U5H_0901/5/2156:2161,
1/5/2173:2180
Kink-turn related
geometric
IL_5TBW_083
NA
IL_3U5H_0911/5/2196:2199,
1/5/2245:2246
Major groove intercalation
geometric
IL_5TBW_084
NA
IL_3U5H_0921/5/2200:2201,
1/5/2241:2244
Major groove intercalation
geometric
IL_5TBW_085
NA
IL_3U5H_0931/5/2204:2206,
1/5/2237:2238
Single bulged U
geometric
IL_5TBW_134
NA
IL_3U5H_0941/5/2276:2277,
1/5/2307:2310
Bulged stacked bases
geometric
IL_5TBW_089
NA
IL_3U5H_0951/5/2277:2288,
1/5/2304:2307
No text annotation
geometric
IL_5TBW_090
NA
IL_3U5H_0961/5/2391:2394,
1/5/2986:2988
Major groove platform with extra pair
geometric
IL_5TBW_091
NA
IL_3U5H_0971/5/2396:2398,
1/5/2981:2984
Major groove platform with intercalation
geometric
IL_5TBW_092
NA
IL_3U5H_0981/5/2409:2411,
1/5/2811:2812
Single bulged U
geometric
IL_5TBW_093
NA
IL_3U5H_0991/5/2412:2413,
1/5/2807:2810
Minor groove platform
geometric
IL_5TBW_094
NA
IL_3U5H_1001/5/2423:2425,
1/5/2604:2607
Isolated tHS basepair with bulges
geometric
IL_5TBW_095
NA
IL_3U5H_1011/5/2520:2526,
1/5/2584:2587
No text annotation
geometric
IL_5TBW_096
NA
IL_3U5H_1031/5/2614:2615,
1/5/2625:2627
Single bulged A
geometric
IL_5TBW_098
NA
IL_3U5H_1041/5/2666:2668,
1/5/2686:2690
Isolated tHS basepair with bulges
geometric
IL_5TBW_099
NA
IL_3U5H_1051/5/2714:2716,
1/5/2740:2741
Single bulged A
geometric
IL_5WWT_001
IL_31462.6
IL_3U5H_1061/5/2718:2721,
1/5/2735:2738
Tandem non-canonical cWW pairs
geometric
IL_5TBW_100
NA
IL_3U5H_1071/5/2770:2773,
1/5/2787:2788
Single stack bend with bulge
geometric
IL_5TBW_101
NA
IL_3U5H_1081/5/2823:2824,
1/5/2865:2867
Major groove platform
geometric
IL_5TBW_102
NA
IL_3U5H_1091/5/2824:2826,
1/5/2863:2865
Isolated non-canonical cWW pair
geometric
IL_5TBW_103
NA
IL_3U5H_1101/5/2826:2828,
1/5/2862:2863
Major groove platform
geometric
IL_4V9F_083
IL_07039.3
IL_3U5H_1111/5/2828:2830,
1/5/2858:2862
Major groove minor groove platform with extra cWW
geometric
IL_5TBW_105
NA
IL_3U5H_1121/5/2835:2839,
1/5/2849:2853
Triple sheared
geometric
IL_5TBW_106
NA
IL_3U5H_1131/5/2876:2877,
1/5/2949:2951
Major groove platform
geometric
IL_5TBW_107
NA
IL_3U5H_1141/5/2879:2881,
1/5/2943:2947
Isolated non-canonical cWW with bulges
geometric
IL_5TBW_108
NA
IL_3U5H_1151/5/2881:2882,
1/5/2940:2943
Multiple bulged bases
geometric
IL_5TBW_109
NA
IL_3U5H_1161/5/2889:2891,
1/5/2912:2914
Isolated non-canonical cWW pair
geometric
IL_5TBW_110
NA
IL_3U5H_1171/5/2891:2892,
1/5/2909:2912
Major groove platform with intercalation
geometric
IL_5TBW_111
NA
IL_3U5H_1181/5/2918:2920,
1/5/2926:2928
Isolated non-canonical cWW pair
geometric
IL_5TBW_112
NA
IL_3U5H_1191/5/2960:2961,
1/5/2970:2972
Single bulged A
geometric
IL_5TBW_113
NA
IL_3U5H_1201/5/3004:3007,
1/5/3139:3144
Double sheared
geometric
IL_5TBW_114
NA
IL_3U5H_1211/5/3012:3014,
1/5/3040:3042
Isolated non-canonical cWW pair
geometric
IL_5TBW_115
NA
IL_3U5H_1221/5/3018:3025,
1/5/3030:3036
8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_116
NA
IL_3U5H_1231/5/3047:3051,
1/5/3091:3094
Major groove minor groove platform with tHH
geometric
IL_5TBW_117
NA
IL_3U5H_1241/5/3054:3059,
1/5/3084:3088
UAA/GAN related
geometric
IL_5TBW_118
NA
IL_3U5H_1251/5/3063:3064,
1/5/3077:3080
Multiple bulged bases
geometric
IL_5TBW_119
NA
IL_3U5H_1261/5/3103:3107,
1/5/3127:3131
UAA/GAN
geometric
IL_5TBW_120
NA
IL_3U5H_1281/5/3168:3170,
1/5/3280:3282
Isolated non-canonical cWW pair
geometric
IL_2OE8_001
IL_28037.2
IL_3U5H_1291/5/3177:3179,
1/5/3210:3211
Single bulged A
geometric
IL_5TBW_123
NA
IL_3U5H_1301/5/3179:3188,
1/5/3204:3210
No text annotation
geometric
IL_5TBW_124
NA
IL_3U5H_1311/5/3193:3194,
1/5/3197:3199
Single bulged U
geometric
IL_5TBW_125
NA
IL_3U5H_1321/5/3225:3229,
1/5/3258:3260
No text annotation
geometric
IL_5TBW_126
NA
IL_3U5H_1331/5/3233:3235,
1/5/3252:3254
Isolated non-canonical cWW pair
geometric
IL_5TBW_042
NA
IL_3U5H_1341/5/3235:3238,
1/5/3249:3252
Tandem non-canonical cWW pairs
geometric
IL_6MWN_005
IL_77658.1
IL_3U5H_1351/5/3300:3303,
1/5/3311:3314
Tandem non-canonical cWW pairs
geometric
IL_5TBW_129
NA
IL_3U5H_1361/5/3318:3320,
1/5/3387:3388
Single bulged U
geometric
IL_5J7L_298
IL_89505.4
IL_3U5H_1371/5/3324:3325,
1/5/3381:3383
Single bulged U
geometric
IL_5TBW_131
NA
IL_3U5H_1381/5/3328:3330,
1/5/3373:3378
Isolated non-canonical cWW pair
geometric
IL_5TBW_132
NA
IL_3U5H_1391/5/3332:3337,
1/5/3367:3371
No text annotation
geometric
IL_5TBW_133
NA
IL_3U5H_1401/5/3340:3342,
1/5/3363:3364
Single bulged U
geometric
IL_4V88_439
NA
IL_3U5H_1411/5/3342:3345,
1/5/3360:3363
Double sheared
geometric
IL_4V9F_100
IL_09705.15
IL_3U5H_1421/5/3349:3350,
1/5/3353:3356
Multiple bulged bases
geometric
IL_7V9E_001
NA
IL_3U5H_1431/7/15:16,
1/7/63:65
Single bulged A
geometric
IL_5TBW_372
NA
IL_3U5H_1441/7/21:27,
1/7/53:58
Minor groove platform related
geometric
IL_5TBW_373
NA
IL_3U5H_1451/7/28:29,
1/7/49:52
Minor groove platform
geometric
IL_5TBW_374
NA
IL_3U5H_1461/7/29:30,
1/7/47:49
Single stack bend
geometric
IL_5TBW_375
NA
IL_3U5H_1471/7/32:36,
1/7/41:45
Symmetric double minor groove platform
geometric
IL_5TBW_376
NA
IL_3U5H_1481/7/72:80,
1/7/100:106
8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_377
NA
IL_3U5H_1491/7/84:87,
1/7/94:96
Isolated non-canonical cWW pair
geometric
IL_5TBW_378
NA
IL_3U5H_1501/8/44:64,
1/8/96:100
No text annotation
geometric
IL_5TBW_144
NA
IL_3U5H_1511/8/64:66,
1/8/93:96
Isolated non-canonical cWW pair
geometric
IL_5TBW_145
NA
IL_3U5H_1521/8/68:69,
1/8/89:91
Single bulged U
geometric
IL_5TBW_146
NA

Problematic loops

#loop idProblemSequence
IL_3U5H_011No text annotation
IL_3U5H_012Major groove platform with extra pair
IL_3U5H_018No text annotation
IL_3U5H_038No text annotation
IL_3U5H_059Kink-turn
IL_3U5H_060No text annotation
IL_3U5H_061Major groove platform with extra cWW
IL_3U5H_072Isolated non-canonical cWW pair
IL_3U5H_127No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_3U5H_0011/5/113:123,
1/5/149:158,
1/5/263:267
No text annotation
geometric
J3_8P9A_042
J3_19664.1
J3_3U5H_0021/5/814:820,
1/5/905:907,
1/5/923:926
No text annotation
geometric
J3_8P9A_049
J3_64189.2
J3_3U5H_0031/5/829:831,
1/5/863:867,
1/5/892:895
No text annotation
geometric
J3_8CRE_010
J3_44724.7
J3_3U5H_0051/5/1479:1485,
1/5/1857:1859,
1/5/1871:1874
No text annotation
geometric
J3_8P9A_053
J3_19545.2
J3_3U5H_0061/5/1488:1491,
1/5/1837:1843,
1/5/1852:1854
No text annotation
geometric
J3_8P9A_054
J3_19545.2
J3_3U5H_0071/5/2432:2435,
1/5/2512:2517,
1/5/2590:2597
No text annotation
geometric
J3_8CRE_019
J3_84052.1
J3_3U5H_0081/5/2529:2532,
1/5/2547:2563,
1/5/2578:2581
No text annotation
geometric
J3_8P9A_060
J3_28639.1
J3_3U5H_0091/5/2664:2666,
1/5/2690:2692,
1/5/2701:2706
No text annotation
geometric
J3_8P9A_062
J3_61124.2
J3_3U5H_0101/5/2886:2889,
1/5/2914:2916,
1/5/2930:2936
No text annotation
geometric
J3_8P9A_063
J3_62630.1
J3_3U5H_0111/5/3298:3300,
1/5/3314:3318,
1/5/3388:3390
No text annotation
geometric
J3_8P9A_065
J3_81015.1

Problematic loops

#loop idProblemSequence
J3_3U5H_004No text annotation

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