HL_3U5H_068

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

3U5H|1|5|G|3116, 3U5H|1|5|C|3120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70420.7

Basepair signature

cWW-tSH-cWH-tSH-tWH-tHW-tHW-R-R

Number of instances in this motif group

10

Unit IDs

3U5H|1|5|C|3110
3U5H|1|5|U|3111
3U5H|1|5|G|3112
3U5H|1|5|A|3113
3U5H|1|5|A|3114
3U5H|1|5|C|3115
3U5H|1|5|G|3116
3U5H|1|5|C|3117
3U5H|1|5|C|3118
3U5H|1|5|U|3119
3U5H|1|5|C|3120
3U5H|1|5|U|3121
3U5H|1|5|A|3122
3U5H|1|5|A|3123
3U5H|1|5|G|3124

Current chains

Chain 5

25S rRNA

Nearby chains