HL_3UCZ_002

3D structure

PDB id

3UCZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

The c-di-GMP-I riboswitch bound to GpG

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CAUUGCACUCCG

Length

12 nucleotides

Bulged bases

3UCZ|1|R|C|664

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_15603.2

Basepair signature

cWW-R-R-R-R-R-R-R-R-R

Number of instances in this motif group

9

Unit IDs

3UCZ|1|R|C|65
3UCZ|1|R|A|660
3UCZ|1|R|U|661
3UCZ|1|R|U|662
3UCZ|1|R|G|663
3UCZ|1|R|C|664
3UCZ|1|R|A|665
3UCZ|1|R|C|666
3UCZ|1|R|U|667
3UCZ|1|R|C|668
3UCZ|1|R|C|669
3UCZ|1|R|G|75

Current chains

Chain R

RNA (92-MER)

Nearby chains

Chain P

U1 small nuclear ribonucleoprotein A