HL_3ZGZ_002

3D structure

PDB id

3ZGZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and toxic moiety from agrocin 84 (TM84) in aminoacylation-like conformation

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GCGCG*C

Length

6 nucleotides

Bulged bases

3ZGZ|1|B|G|47|||E, 3ZGZ|1|B|G|47|||E

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3ZGZ_002 not in the Motif Atlas

Geometric match to HL_5T16_002

Geometric discrepancy: 0.1487

The information below is about HL_5T16_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

3ZGZ|1|B|G|47|||A
3ZGZ|1|B|C|47|||D
3ZGZ|1|B|G|47|||E
3ZGZ|1|B|C|47|||F
3ZGZ|1|B|G|47|||E
*
3ZGZ|1|B|C|47|||F

Current chains

Chain B

TRNA-LEU UAA ISOACCEPTOR

Nearby chains

Chain A

LEUCINE--TRNA LIGASE