HL_4A1B_007

3D structure

PDB id

4A1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

GUGACAACC

Length

9 nucleotides

Bulged bases

4A1B|1|1|G|218, 4A1B|1|1|A|219, 4A1B|1|1|C|220

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_68081.8

Basepair signature

cWW-R-R-tWH

Number of instances in this motif group

13

Unit IDs

4A1B|1|1|G|216
4A1B|1|1|U|217
4A1B|1|1|G|218
4A1B|1|1|A|219
4A1B|1|1|C|220
4A1B|1|1|A|221
4A1B|1|1|A|222
4A1B|1|1|C|223
4A1B|1|1|C|224

Current chains

Chain 1

26S RRNA

Nearby chains