3D structure

PDB id
4A1B (explore in PDB, NAKB, or RNA 3D Hub)
Description
T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.
Experimental method
X-RAY DIFFRACTION
Resolution
3.52 Å

Loop

Sequence
GUGACAACC
Length
9 nucleotides
Bulged bases
4A1B|1|1|G|218, 4A1B|1|1|A|219, 4A1B|1|1|C|220
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_68081.8
Basepair signature
cWW-R-R-tWH
Number of instances in this motif group
13

Unit IDs

4A1B|1|1|G|216
4A1B|1|1|U|217
4A1B|1|1|G|218
4A1B|1|1|A|219
4A1B|1|1|C|220
4A1B|1|1|A|221
4A1B|1|1|A|222
4A1B|1|1|C|223
4A1B|1|1|C|224

Current chains

Chain 1
26S RRNA

Nearby chains

No other chains within 10Å

Coloring options:

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