HL_4A1B_015

3D structure

PDB id

4A1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

UCUUGAAACA

Length

10 nucleotides

Bulged bases

4A1B|1|1|C|672

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72498.17

Basepair signature

cWW-tWH-R-R-R

Number of instances in this motif group

78

Unit IDs

4A1B|1|1|U|664
4A1B|1|1|C|665
4A1B|1|1|U|666
4A1B|1|1|U|667
4A1B|1|1|G|668
4A1B|1|1|A|669
4A1B|1|1|A|670
4A1B|1|1|A|671
4A1B|1|1|C|672
4A1B|1|1|A|673

Current chains

Chain 1

26S RRNA

Nearby chains

Chain T

RPL29