3D structure

PDB id
4A1B (explore in PDB, NAKB, or RNA 3D Hub)
Description
T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.
Experimental method
X-RAY DIFFRACTION
Resolution
3.52 Å

Loop

Sequence
AUGAGAACU
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_72498.17
Basepair signature
cWW-tWH-R-R-R
Number of instances in this motif group
78

Unit IDs

4A1B|1|1|A|1488
4A1B|1|1|U|1489
4A1B|1|1|G|1490
4A1B|1|1|A|1491
4A1B|1|1|G|1492
4A1B|1|1|A|1493
4A1B|1|1|A|1494
4A1B|1|1|C|1495
4A1B|1|1|U|1496

Current chains

Chain 1
26S RRNA

Nearby chains

No other chains within 10Å

Coloring options:

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