HL_4A1B_055

3D structure

PDB id

4A1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

UUAAACCAUAACG

Length

13 nucleotides

Bulged bases

4A1B|1|1|A|2626, 4A1B|1|1|C|2633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41833.7

Basepair signature

cWW-tSH-tHH-tWW-R-R-R

Number of instances in this motif group

10

Unit IDs

4A1B|1|1|U|2622
4A1B|1|1|U|2623
4A1B|1|1|A|2624
4A1B|1|1|A|2625
4A1B|1|1|A|2626
4A1B|1|1|C|2627
4A1B|1|1|C|2628
4A1B|1|1|A|2629
4A1B|1|1|U|2630
4A1B|1|1|A|2631
4A1B|1|1|A|2632
4A1B|1|1|C|2633
4A1B|1|1|G|2634

Current chains

Chain 1

26S RRNA

Nearby chains

Chain T

RPL29