HL_4A2I_032

3D structure

PDB id

4A2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis Factor

Experimental method

ELECTRON MICROSCOPY

Resolution

16.5 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4A2I_032 not in the Motif Atlas

Homologous match to HL_4LFB_032

Geometric discrepancy: 0.0901

The information below is about HL_4LFB_032

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4A2I|1|A|G|1515
4A2I|1|A|G|1516
4A2I|1|A|G|1517
4A2I|1|A|A|1518
4A2I|1|A|A|1519
4A2I|1|A|C|1520

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain V

PUTATIVE RIBOSOME BIOGENESIS GTPASE RSGA