HL_4AOB_005

3D structure

PDB id

4AOB (explore in PDB, NAKB, or RNA 3D Hub)

Description

SAM-I riboswitch containing the T. solenopsae Kt-23 in complex with S- adenosyl methionine

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

AAAAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_43074.16

Basepair signature

cWW-tSH-R-R

Number of instances in this motif group

272

Unit IDs

4AOB|1|A|A|49||||7_555
4AOB|1|A|A|50||||7_555
4AOB|1|A|A|51||||7_555
4AOB|1|A|A|52||||7_555
4AOB|1|A|A|53||||7_555
4AOB|1|A|U|54||||7_555

Current chains

Chain A

SAM-I RIBOSWITCH

Nearby chains