3D structure

PDB id
4ARI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole AN2679 in the editing conformation
Experimental method
X-RAY DIFFRACTION
Resolution
2.08 Å

Loop

Sequence
AGGGAUCCCU
Length
10 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4ARI_002 not in the Motif Atlas
Geometric match to HL_5TBW_226
Geometric discrepancy: 0.3955
The information below is about HL_5TBW_226
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_59342.2
Basepair signature
cWW-F-F-F-F-cWW-F-F
Number of instances in this motif group
5

Unit IDs

4ARI|1|B|A|27
4ARI|1|B|G|28
4ARI|1|B|G|29
4ARI|1|B|G|30
4ARI|1|B|A|31
4ARI|1|B|U|39
4ARI|1|B|C|40
4ARI|1|B|C|41
4ARI|1|B|C|42
4ARI|1|B|U|43

Current chains

Chain B
TRNA-LEU5 (UAA ISOACEPTOR)

Nearby chains

Chain A
LEUCINE--TRNA LIGASE

Coloring options:


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