HL_4ATO_001

3D structure

PDB id

4ATO (explore in PDB, NAKB, or RNA 3D Hub)

Description

New insights into the mechanism of bacterial Type III toxin-antitoxin systems: selective toxin inhibition by a non-coding RNA pseudoknot

Experimental method

X-RAY DIFFRACTION

Resolution

2.2 Å

Loop

Sequence

UUACCGUAGUA

Length

11 nucleotides

Bulged bases (A, C, G, U)

21U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_04171.5

Basepair signature

cWW-cWW-F-F-cSS-F-F

Number of instances in this motif group

7

Unit IDs

4ATO|1|G|U|15
4ATO|1|G|U|16
4ATO|1|G|A|17
4ATO|1|G|C|18
4ATO|1|G|C|19
4ATO|1|G|G|20
4ATO|1|G|U|21
4ATO|1|G|A|22
4ATO|1|G|G|23
4ATO|1|G|U|24
4ATO|1|G|A|25

Current chains

Chain G

TOXI

Nearby chains

Chain A

TOXN