HL_4B3T_035
3D structure
- PDB id
- 4B3T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 30S ribosome in complex with compound 39
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4B3T_035 not in the Motif Atlas
- Geometric match to HL_4B3R_034
- Geometric discrepancy: 0.0949
- The information below is about HL_4B3R_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 46
Unit IDs
4B3T|1|Z|A|31
4B3T|1|Z|U|32
4B3T|1|Z|U|33
4B3T|1|Z|G|34
4B3T|1|Z|A|35
4B3T|1|Z|A|36
4B3T|1|Z|A|37
4B3T|1|Z|A|38
4B3T|1|Z|U|39
Current chains
- Chain Z
- 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP)-3'
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain L
- 30S RIBOSOMAL PROTEIN S12
- Chain W
- 5'-R(*UP*UP*CP*AP*AP*AP)-3'
Coloring options: