HL_4BTS_020

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_020 not in the Motif Atlas

Homologous match to HL_4V88_206

Geometric discrepancy: 0.1286

The information below is about HL_4V88_206

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

4BTS|1|AA|A|878
4BTS|1|AA|G|879
4BTS|1|AA|G|880
4BTS|1|AA|U|881
4BTS|1|AA|G|882
4BTS|1|AA|A|883
4BTS|1|AA|A|884
4BTS|1|AA|A|885
4BTS|1|AA|U|886
4BTS|1|AA|U|887

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain AK

40S RIBOSOMAL PROTEIN RPS14E