HL_4BTS_068

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CAAUAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_068 not in the Motif Atlas

Geometric match to HL_1F1T_001

Geometric discrepancy: 0.3422

The information below is about HL_1F1T_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59843.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4BTS|1|BA|C|1367
4BTS|1|BA|A|1368
4BTS|1|BA|A|1369
4BTS|1|BA|U|1370
4BTS|1|BA|A|1371
4BTS|1|BA|A|1372
4BTS|1|BA|G|1373

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain B1

40S RIBOSOMAL PROTEIN RPS28E

Chain BV

40S RIBOSOMAL PROTEIN RPS17E