HL_4BTS_083
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 4BTS|1|CA|C|393, 4BTS|1|CA|G|394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4BTS_083 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.1392
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4BTS|1|CA|C|384
4BTS|1|CA|C|385
4BTS|1|CA|U|386
4BTS|1|CA|G|387
4BTS|1|CA|A|388
4BTS|1|CA|G|389
4BTS|1|CA|A|390
4BTS|1|CA|A|391
4BTS|1|CA|A|392
4BTS|1|CA|C|393
4BTS|1|CA|G|394
4BTS|1|CA|G|395
Current chains
- Chain CA
- 18S ribosomal RNA
Nearby chains
- Chain C2
- 40S RIBOSOMAL PROTEIN S8
- Chain CP
- 40S RIBOSOMAL PROTEIN S24
- Chain CW
- 40S RIBOSOMAL PROTEIN RPS4E
- Chain CY
- 40S RIBOSOMAL PROTEIN S6
Coloring options: