HL_4BTS_085

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UAAUUCA

Length

7 nucleotides

Bulged bases

4BTS|1|CA|U|446, 4BTS|1|CA|C|447

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_085 not in the Motif Atlas

Homologous match to HL_4V88_197

Geometric discrepancy: 0.1752

The information below is about HL_4V88_197

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4BTS|1|CA|U|442
4BTS|1|CA|A|443
4BTS|1|CA|A|444
4BTS|1|CA|U|445
4BTS|1|CA|U|446
4BTS|1|CA|C|447
4BTS|1|CA|A|448

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain CP

40S RIBOSOMAL PROTEIN S24

Chain CW

40S RIBOSOMAL PROTEIN RPS4E