HL_4BTS_092

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CAUUUUAUUGGUUCUUG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_092 not in the Motif Atlas

Homologous match to HL_8C3A_210

Geometric discrepancy: 0.5914

The information below is about HL_8C3A_210

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08554.1

Basepair signature

cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4BTS|1|CA|C|808
4BTS|1|CA|A|809
4BTS|1|CA|U|810
4BTS|1|CA|U|811
4BTS|1|CA|U|812
4BTS|1|CA|U|813
4BTS|1|CA|A|814
4BTS|1|CA|U|815
4BTS|1|CA|U|816
4BTS|1|CA|G|817
4BTS|1|CA|G|818
4BTS|1|CA|U|819
4BTS|1|CA|U|820
4BTS|1|CA|C|821
4BTS|1|CA|U|822
4BTS|1|CA|U|823
4BTS|1|CA|G|824

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain CQ

40S RIBOSOMAL PROTEIN RPS11E