HL_4BTS_105

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UGGGAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_105 not in the Motif Atlas

Homologous match to HL_4V88_218

Geometric discrepancy: 0.2776

The information below is about HL_4V88_218

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

4BTS|1|CA|U|1472
4BTS|1|CA|G|1473
4BTS|1|CA|G|1474
4BTS|1|CA|G|1475
4BTS|1|CA|A|1476
4BTS|1|CA|A|1477

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain CM

40S RIBOSOMAL PROTEIN RPS18E

Chain CT

40S RIBOSOMAL PROTEIN RPS19E