HL_4BTS_106
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UUUGGAAUUGUG
- Length
- 12 nucleotides
- Bulged bases
- 4BTS|1|CA|G|1531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4BTS_106 not in the Motif Atlas
- Homologous match to HL_4V88_219
- Geometric discrepancy: 0.1646
- The information below is about HL_4V88_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4BTS|1|CA|U|1522
4BTS|1|CA|U|1523
4BTS|1|CA|U|1524
4BTS|1|CA|G|1525
4BTS|1|CA|G|1526
4BTS|1|CA|A|1527
4BTS|1|CA|A|1528
4BTS|1|CA|U|1529
4BTS|1|CA|U|1530
4BTS|1|CA|G|1531
4BTS|1|CA|U|1532
4BTS|1|CA|G|1533
Current chains
- Chain CA
- 18S ribosomal RNA
Nearby chains
- Chain CM
- 40S RIBOSOMAL PROTEIN RPS18E
- Chain CN
- 40S RIBOSOMAL PROTEIN RPS29E
- Chain CS
- 40S RIBOSOMAL PROTEIN RPS15E
- Chain CT
- 40S RIBOSOMAL PROTEIN RPS19E
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