3D structure

PDB id
4BTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
GUGUAAAUCUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_95765.1
Basepair signature
cWW-R-R-R-R-R-R-R-R
Number of instances in this motif group
11

Unit IDs

4BTS|1|DA|G|514
4BTS|1|DA|U|515
4BTS|1|DA|G|516
4BTS|1|DA|U|517
4BTS|1|DA|A|518
4BTS|1|DA|A|519
4BTS|1|DA|A|520
4BTS|1|DA|U|521
4BTS|1|DA|C|522
4BTS|1|DA|U|523
4BTS|1|DA|C|524

Current chains

Chain DA
18S ribosomal RNA

Nearby chains

Chain DD
40S RIBOSOMAL PROTEIN RPS9E
Chain DP
40S RIBOSOMAL PROTEIN S24

Coloring options:

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