HL_4C8Y_001

3D structure

PDB id

4C8Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cas6 (TTHA0078) substrate mimic complex

Experimental method

X-RAY DIFFRACTION

Resolution

1.8 Å

Loop

Sequence

CGAG

Length

4 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4C8Y_001 not in the Motif Atlas

Geometric match to HL_2CZJ_007

Geometric discrepancy: 0.2666

The information below is about HL_2CZJ_007

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_23696.2

Basepair signature

cWW-F-F

Number of instances in this motif group

8

Unit IDs

4C8Y|1|C|C|20
4C8Y|1|C|G|21
4C8Y|1|C|A|24
4C8Y|1|C|G|25

Current chains

Chain C

R1 REPEAT RNA SUBSTRATE MIMIC

Nearby chains

Chain A

CAS6A

Chain B

CAS6A