HL_4C8Z_001

3D structure

PDB id

4C8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cas6 (TTHA0078) product complex

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CGAAG*G

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4C8Z_001 not in the Motif Atlas

Geometric match to HL_6JQ6_004

Geometric discrepancy: 0.2481

The information below is about HL_6JQ6_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

4C8Z|1|C|C|20
4C8Z|1|C|G|21
4C8Z|1|C|A|23
4C8Z|1|C|A|24
4C8Z|1|C|G|25
*
4C8Z|1|C|G|25

Current chains

Chain C

R1 REPEAT RNA CLEAVAGE PRODUCT

Nearby chains

Chain A

CAS6A