HL_4CSU_018

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GCUUAGGC

Length

8 nucleotides

Bulged bases

4CSU|1|B|U|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_018 not in the Motif Atlas

Geometric match to HL_2Y8Y_001

Geometric discrepancy: 0.3612

The information below is about HL_2Y8Y_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4CSU|1|B|G|543
4CSU|1|B|C|544
4CSU|1|B|U|545
4CSU|1|B|U|546
4CSU|1|B|A|547
4CSU|1|B|G|548
4CSU|1|B|G|549
4CSU|1|B|C|550

Current chains

Chain B

23S RRNA

Nearby chains

Chain J

50S RIBOSOMAL PROTEIN L13