HL_4CSU_027

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

4CSU|1|B|C|889

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_027 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.3239

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

4CSU|1|B|C|885
4CSU|1|B|A|886
4CSU|1|B|U|887
4CSU|1|B|C|888
4CSU|1|B|C|889
4CSU|1|B|C|890
4CSU|1|B|G|891

Current chains

Chain B

23S RRNA

Nearby chains