HL_4CSU_029

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_029 not in the Motif Atlas

Homologous match to HL_4WF9_028

Geometric discrepancy: 0.4077

The information below is about HL_4WF9_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

4CSU|1|B|G|978
4CSU|1|B|A|979
4CSU|1|B|A|980
4CSU|1|B|A|981
4CSU|1|B|C|982
4CSU|1|B|A|983
4CSU|1|B|A|984
4CSU|1|B|C|985

Current chains

Chain B

23S RRNA

Nearby chains

Chain Q

50S RIBOSOMAL PROTEIN L20

Chain R

50S RIBOSOMAL PROTEIN L21