HL_4CSU_037

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_037 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.4099

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4CSU|1|B|G|1389
4CSU|1|B|U|1390
4CSU|1|B|U|1391
4CSU|1|B|A|1392
4CSU|1|B|A|1393
4CSU|1|B|U|1394
4CSU|1|B|A|1395
4CSU|1|B|U|1396
4CSU|1|B|U|1397
4CSU|1|B|C|1398

Current chains

Chain B

23S RRNA

Nearby chains

Chain T

50S RIBOSOMAL PROTEIN L23