HL_4CSU_060

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_060 not in the Motif Atlas

Homologous match to HL_7A0S_057

Geometric discrepancy: 0.3009

The information below is about HL_7A0S_057

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

4CSU|1|B|C|2374
4CSU|1|B|G|2375
4CSU|1|B|A|2376
4CSU|1|B|A|2377
4CSU|1|B|A|2378
4CSU|1|B|G|2379

Current chains

Chain B

23S RRNA

Nearby chains

Chain 4

50S RIBOSOMAL PROTEIN L33

Chain O

50S RIBOSOMAL PROTEIN L18