HL_4CSU_064

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_064 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.428

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

4CSU|1|B|C|2551
4CSU|1|B|U|2552
4CSU|1|B|G|2553
4CSU|1|B|U|2554
4CSU|1|B|U|2555
4CSU|1|B|C|2556
4CSU|1|B|G|2557

Current chains

Chain B

23S RRNA

Nearby chains

Chain 9

GTPASE OBGE/CGTA