HL_4CSU_072
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- ACCCCAUGCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 4CSU|1|A|C|35, 4CSU|1|A|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4CSU_072 not in the Motif Atlas
- Homologous match to HL_4V9F_074
- Geometric discrepancy: 0.3122
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4CSU|1|A|A|34
4CSU|1|A|C|35
4CSU|1|A|C|36
4CSU|1|A|C|37
4CSU|1|A|C|38
4CSU|1|A|A|39
4CSU|1|A|U|40
4CSU|1|A|G|41
4CSU|1|A|C|42
4CSU|1|A|C|43
4CSU|1|A|G|44
4CSU|1|A|A|45
4CSU|1|A|A|46
4CSU|1|A|C|47
4CSU|1|A|U|48
Current chains
- Chain A
- 5S RRNA
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S RIBOSOMAL PROTEIN L5
- Chain O
- 50S RIBOSOMAL PROTEIN L18
Coloring options: