HL_4CUX_016

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGCCGGUCGGAUUUCC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84720.1

Basepair signature

cWW-L-R-R-R-L-cWW-L-R-L-cWW-R

Number of instances in this motif group

1

Unit IDs

4CUX|1|2|G|651
4CUX|1|2|G|652
4CUX|1|2|C|653
4CUX|1|2|C|654
4CUX|1|2|G|655
4CUX|1|2|G|656
4CUX|1|2|U|657
4CUX|1|2|C|658
4CUX|1|2|G|676
4CUX|1|2|G|677
4CUX|1|2|A|678
4CUX|1|2|U|679
4CUX|1|2|U|680
4CUX|1|2|U|681
4CUX|1|2|C|682
4CUX|1|2|C|683

Current chains

Chain 2

18S RRNA

Nearby chains