HL_4CUX_023

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAUCAGAUACC

Length

11 nucleotides

Bulged bases

4CUX|1|2|U|1004

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46175.6

Basepair signature

cWW-R-tSH-R-R-R-R

Number of instances in this motif group

17

Unit IDs

4CUX|1|2|G|997
4CUX|1|2|A|998
4CUX|1|2|U|999
4CUX|1|2|C|1000
4CUX|1|2|A|1001
4CUX|1|2|G|1002
4CUX|1|2|A|1003
4CUX|1|2|U|1004
4CUX|1|2|A|1005
4CUX|1|2|C|1006
4CUX|1|2|C|1007

Current chains

Chain 2

18S RRNA

Nearby chains