HL_4CXE_004

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CGCCCCGCGGGGCGCGG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|C|126
4CXE|1|2|G|127
4CXE|1|2|C|128
4CXE|1|2|C|129
4CXE|1|2|C|130
4CXE|1|2|C|131
4CXE|1|2|G|132
4CXE|1|2|C|133
4CXE|1|2|G|134
4CXE|1|2|G|135
4CXE|1|2|G|136
4CXE|1|2|G|137
4CXE|1|2|C|138
4CXE|1|2|G|139
4CXE|1|2|C|140
4CXE|1|2|G|141
4CXE|1|2|G|142

Current chains

Chain 2

28S RRNA

Nearby chains

Chain 3

5.8S ribosomal RNA; 5.8S rRNA