HL_4CXE_026

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GGUAAGC

Length

7 nucleotides

Bulged bases

4CXE|1|2|G|1847

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CXE_026 not in the Motif Atlas

Geometric match to HL_8P9A_137

Geometric discrepancy: 0.1218

The information below is about HL_8P9A_137

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

4CXE|1|2|G|1842
4CXE|1|2|G|1843
4CXE|1|2|U|1844
4CXE|1|2|A|1845
4CXE|1|2|A|1846
4CXE|1|2|G|1847
4CXE|1|2|C|1848

Current chains

Chain 2

28S RRNA

Nearby chains