HL_4CXE_072
3D structure
- PDB id
- 4CXE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- CAGCUAGCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4CXE_072 not in the Motif Atlas
- Geometric match to HL_8CRE_074
- Geometric discrepancy: 0.1378
- The information below is about HL_8CRE_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_93438.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4CXE|1|3|C|47
4CXE|1|3|A|48
4CXE|1|3|G|49
4CXE|1|3|C|50
4CXE|1|3|U|51
4CXE|1|3|A|52
4CXE|1|3|G|53
4CXE|1|3|C|54
4CXE|1|3|U|55
4CXE|1|3|G|56
Current chains
- Chain 3
- 5.8S RRNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: