HL_4CXE_074

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

ACUU

Length

4 nucleotides

Bulged bases

4CXE|1|3|U|110

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CXE_074 not in the Motif Atlas

Geometric match to HL_8CRE_052

Geometric discrepancy: 0.2386

The information below is about HL_8CRE_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4CXE|1|3|A|108
4CXE|1|3|C|109
4CXE|1|3|U|110
4CXE|1|3|U|111

Current chains

Chain 3

5.8S RRNA

Nearby chains

Chain 2

Large subunit ribosomal RNA; LSU rRNA