HL_4CXE_080

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GGACUGUCCCCAGUGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|G|1153
4CXE|1|2|G|1154
4CXE|1|2|A|1155
4CXE|1|2|C|1156
4CXE|1|2|U|1157
4CXE|1|2|G|1158
4CXE|1|2|U|1159
4CXE|1|2|C|1160
4CXE|1|2|C|1161
4CXE|1|2|C|1162
4CXE|1|2|C|1163
4CXE|1|2|A|1164
4CXE|1|2|G|1165
4CXE|1|2|U|1166
4CXE|1|2|G|1167
4CXE|1|2|C|1168

Current chains

Chain 2

28S RRNA

Nearby chains

Chain 4

5S ribosomal RNA; 5S rRNA