HL_4CXE_081

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

UCGCACGAAA

Length

10 nucleotides

Bulged bases

4CXE|1|2|C|1347, 4CXE|1|2|C|1349

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|U|1344
4CXE|1|2|C|1345
4CXE|1|2|G|1346
4CXE|1|2|C|1347
4CXE|1|2|A|1348
4CXE|1|2|C|1349
4CXE|1|2|G|1350
4CXE|1|2|A|1351
4CXE|1|2|A|1352
4CXE|1|2|A|1353

Current chains

Chain 2

28S RRNA

Nearby chains

Chain 3

5.8S ribosomal RNA; 5.8S rRNA