HL_4DV3_005

3D structure

PDB id

4DV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

4DV3|1|A|U|202, 4DV3|1|A|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4DV3_005 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.3945

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

4DV3|1|A|G|200
4DV3|1|A|C|201
4DV3|1|A|U|202
4DV3|1|A|U|203
4DV3|1|A|U|204
4DV3|1|A|G|216
4DV3|1|A|C|217

Current chains

Chain A

16S rRNA

Nearby chains