HL_4DV5_030
3D structure
- PDB id
- 4DV5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G, bound with streptomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.68 Å
Loop
- Sequence
- GAUCAGCCAUGC
- Length
- 12 nucleotides
- Bulged bases
- 4DV5|1|A|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4DV5_030 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.1726
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4DV5|1|A|G|1356
4DV5|1|A|A|1357
4DV5|1|A|U|1358
4DV5|1|A|C|1359
4DV5|1|A|A|1360
4DV5|1|A|G|1361
4DV5|1|A|C|1361|||A
4DV5|1|A|C|1362
4DV5|1|A|A|1363
4DV5|1|A|U|1364
4DV5|1|A|G|1365
4DV5|1|A|C|1366
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- ribosomal protein S9
- Chain J
- ribosomal protein S10
- Chain M
- ribosomal protein S13
- Chain N
- ribosomal protein S14
- Chain U
- ribosomal protein THX
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