HL_4ILM_007

3D structure

PDB id

4ILM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRISPR RNA Processing endoribonuclease

Experimental method

X-RAY DIFFRACTION

Resolution

3.07 Å

Loop

Sequence

UACUAUA

Length

7 nucleotides

Bulged bases

4ILM|1|I|A|9||||1_655, 4ILM|1|I|U|11||||1_655, 4ILM|1|I|U|13||||1_655

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4ILM_007 not in the Motif Atlas

Geometric match to HL_4ILM_002

Geometric discrepancy: 0.1724

The information below is about HL_4ILM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56131.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

4ILM|1|I|U|8||||1_655
4ILM|1|I|A|9||||1_655
4ILM|1|I|C|10||||1_655
4ILM|1|I|U|11||||1_655
4ILM|1|I|A|12||||1_655
4ILM|1|I|U|13||||1_655
4ILM|1|I|A|14||||1_655

Current chains

Chain I

RNA (5'-R(*GP*CP*UP*AP*AP*UP*CP*UP*AP*CP*UP*AP*UP*AP*GP*A)-3')

Nearby chains

Chain D

CRISPR-associated endoribonuclease Cas6 2

Chain H

CRISPR-associated endoribonuclease Cas6 2