HL_4IOA_001
3D structure
- PDB id
- 4IOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAUUACCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99402.2
- Basepair signature
- cWW-R-R-cSH-cSH-R-R
- Number of instances in this motif group
- 5
Unit IDs
4IOA|1|X|C|58
4IOA|1|X|G|59
4IOA|1|X|A|60
4IOA|1|X|U|61
4IOA|1|X|U|62
4IOA|1|X|A|63
4IOA|1|X|C|64
4IOA|1|X|C|65
4IOA|1|X|U|66
4IOA|1|X|G|67
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L23
- Chain V
- 50S ribosomal protein L29
Coloring options: