HL_4IOA_013

3D structure

PDB id

4IOA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

4IOA|1|X|G|424

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32512.5

Basepair signature

cWW-R-R-R-R

Number of instances in this motif group

16

Unit IDs

4IOA|1|X|G|423
4IOA|1|X|G|424
4IOA|1|X|A|425
4IOA|1|X|C|426
4IOA|1|X|C|427
4IOA|1|X|A|428
4IOA|1|X|C|429
4IOA|1|X|C|430

Current chains

Chain X

23S ribosomal RNA

Nearby chains